What seems to be missing from Mr. Stone's argument, is any association between the chip and denial of God or Christ. Without such a link, it's just another piece of technology - albeit a very annoying one.
More concerning to me would be the loss of privacy. Everywhere you go, someone knows where you are. And that information would be available to anyone for a price.
In the movie "Minority Report", everywhere the protagonist went, he would be bombarded by advertising targeted specifically to him. In this bit of fiction it was done with rental scanners. RFID is much more practical.
“To preserve the government we must also preserve morals. Morality rests on religion; if you destroy the foundation, the superstructure must fall. When the public mind becomes vitiated and corrupt, laws are a nullity and constitutions are waste paper.” – Daniel Webster, 4th of July, 1800, Oration at Hanover, N.H.